|University of Manchester|
|MIB (Manchester Interdisciplinary Biocentre)|
|DBCAT – Encyclopedia of Life project – Genomics Glossaries, Y.F. Leung’s Functional Genomics Portal, Pedro’s Biomolecular Research Tools, Omegabase Sequences and more – portals for all things biological, -Omes Glossary.|
2D gel electrophoresis tutorial in Aber
Catalogue of 2D gel pages on the Web
Mutliident – lots of ways of checking out proteins
PROWL – a resource for protein chemistry and mass spectrometry (and a good one for peptide mass fingerpriting)
Proteome, Inc – a commercial venture with good yeast and worm proteomics
Profound – Bayesian system for peptide mass fingerprinting vs NIH nr database.
|Links for metabolomics are via our Metabolomics Homepage|
|Links for Systems Biology are via our Systems Biology Homepage|
|A Guide to Molecular Sequence Analysis, Pedro’s Biomolecular Research Tools, Biopolymer Markup Language.|
|Biotutor – quick link to all UK Bioscience Departments|
|Amersham IN Cell Analyser, Cellomics ArrayScan, Evotec Opera.|
|Functional Categories for Functional Genomics|
If the functional genomics agenda is to assign function or functional class to genes of unknown function, it is necessary to have a list of the classes to which one might wish to assign them. The following therefore lists some websites in which a listing of suggested functional classes has been given.
Note that many of these classification structures are are strictly hierarchical and are far from optimal. See Kell, D.B. & King, R.D. (2000) On the optimization of classes for the assignment of unidentified reading frames in functional genomics programmes: the need for machine learning. Trends Biotechnol. 18, 93-98. Pubmed abstract. The goal of the Gene Ontology consortium is to bring order and a systematic structure to these terms. Another comparison of functional annotation schemes has been published by SCG Rison, TC Hodgman & JM Thornton (2000) Functional and Integrative Genomics 1, 56-69 – see link here and a Table of links to other functional catalogues.
|Some properties of networks are generic, and we need tools to study and understand them. Links to these are on our Systems Biology page.|
|Genetic Programming and Evolutionary Computing Links|
Very much under construction…
People: John Koza’s Homepage
Last updated: May 31, 2016 at 12:01 pm