Will take a list of Gene names, a list of Measurement names and a list of Column Types and produce a table. All values are coloured in relation to the a reference. In the list of Measurement names, the first Measurement listed is taken to be the reference. Formatted as text.
php run.php -file=../../sequences/geneHunterPHP.xml -display=last -profile="The mouse microarray experiment" -GeneNames="Affy:Mouse430_2:1415670_at,Affy:Mouse430_2:1415671_at,Affy:Mouse430_2:1415672_at,Affy:Mouse430_2:1415673_at" -ColumnType="RMA Normalised" -MeasurementIDs="0,1"
,
$measurement) {
$output .= "\n$measurementName";
foreach ($measurement as $columnName => $column) {
if ($columnName != "Feature_ID") {
$output .= "\n$columnName";
foreach ($column as $key => $value) {
$output .= "\t$value";
}
}
}
}
//print $output;
//die();
]]>
enumerate
Feature
array
Results